ReadsEncoder (htsjdk 5.0.0 API)

All Superinterfaces:: AutoCloseable, Closeable, HtsEncoder<SAMFileHeader, SAMRecord>

All Known Implementing Classes:: BAMEncoder, BAMEncoderV1_0, CRAMEncoder, CRAMEncoderV2_1, CRAMEncoderV3_0, CRAMEncoderV3_1, SAMEncoder, SAMEncoderV1_0

public interface ReadsEncoder extends HtsEncoder<SAMFileHeader, SAMRecord>

Base interface for HtsContentType.ALIGNED_READS encoders.

Method Summary

Methods inherited from interface HtsEncoder
close, getDisplayName, getFileFormat, getVersion, setHeader, write